INSTAAR

Continental Slope Dreamtime
Continental Slope Dreamtime
Continental Slope Dreamtime
Continental Slope Dreamtime
Continental Slope Dreamtime
Continental Slope Dreamtime

cjj

Address:

Institute of Arctic & Alpine Research (INSTAAR)
 University of Colorado at Boulder
 1560 30th Street
 Campus Box 450
 Boulder CO, 80309-0450 

Tel: +1 720 840 3303 

Fax: +1 303 492 6388

Research and Development Fields:

Marine Sediments, Geophysics and Stratigraphy
Computing Methods for Heterogeneous Data
Machine Understanding of Word-Based Data
Materials and Features of the Global Seabed 


Qualifications:

Senior Research Scientist in Environmental Computing, INSTAAR, Univ. Colorado, 2002-
Senior Research Fellow, Univ Adelaide, Adelaide Australia, 2008-
Senior Research Fellow in Marine Geosciences, Sydney Univ, 1991-2001 
Research Fellow in Marine Geosciences, Sydney Univ., 1983-90 
BSc (Sydney, Australia), PhD (Cambridge, UK) 



Research Programs

  • dbSEABED - an Information System of the World's Seafloor
    Seabed information processing leading to mappings on local to global scales; development of new data mining and linguistic processes, development of GIS visualizations for seabed data.
  •  Population Modelling of Carbonate Sediment/Rock Facies
    Carbonate sediments and rocks are mostly biogenic in origin, formed from the growth and turnover of populations of organisms. Population models should be able to model the facies of carbonate accumulation in detail and accurately. 
 Carbo*
  • Extraction of Image Strips from IODP Core Photo Collection
    During the Integrated Ocean Drilling Program (IODP) the core recoveries were photographed in racks containing ~1.5m core sections. This project devised methods to automatically extract image strips from those photos, strips that are compatible with the scanned images of modern technologies.
(Poster)
  • Rationalization of the Geosciences Parameter and Geomaterials Vocabularies
    By applying tools from computational linguistics, the enormous and complex vocabularies for sediment and rock description and analysis can be systematized and used better in query systems via automatically computed ontologies.
-
  • Geophysics, Geotechnics, Sedimentology with Engineering Applications
    The combination of huge amounts of detailed seabed data with geological and geophysical models, plus modern visualization technologies such as GIS assists multiple projects in seafloor object burial, acoustic propagation, and slope stability.  
-
  • Seamless over the Strandline
    One of the great data divides in geosciences is between the substrates and habitats of the land (soils, agriculture) and the marine (sediments, oceanography). This project devised some new computing methods for reconciling the two data domains. It produced joined maps for Louisiana.


Appointments, Qualifications
  • Senior Research Fellow in Marine Geosciences, Ocean Sciences Institute, Sydney Univ, 1991-2001
  • Consultancies and secondments with agencies and companies, 1985-.
    Marine geophysical acquisition, multibeam surveying, marine error analysis, marine tailings disposal monitoring,
    marine platform foundations sampling and analysis, linguistic data processing in geology, shipboard database/GIS systems,
    deep seafloor sediment sampling and photography, marine shallow seismic interpretation.
  • Research Fellow in Marine Geosciences, Ocean Sciences Institute, Sydney Univ., 1983-90
  • Assistant Lecturer, Tutor in Stratigraphy, Australian National University and James Cook University, 1980-1982.
  • PhD (Cambridge, UK)  1979
    with Sidney Sussex College Scholarship for postgraduate study.
  • BSc Hons (Sydney, Australia) 1974
    with various scholarships and awards.

Teaching
  • Australian National University 1980-81: Stratigraphy-palaeontology Year II
  • James Cook University 1982: Stratigraphy-palaeontology Year II
  • University of Sydney: ~1990, 1992: Introductory Oceanography Year I
  • University of Colorado, Boulder ~2009, 2012: Advanced Oceanography Year III
  • University of Colorado, Boulder 2012: Introductory Oceanography Year I

Publications

Published papers

  • Arsenault, M.A., Williams, S.J., Reid. J.A. and Jenkins, C.J. 2010. Geologic characterization of U.S. shelf areas using usSEABED for GIS mapping, habitat delineation, and assessing marine sand and gravel resources.  In:  Bremer, J. (Ed.), Ocean Globe, ESRI Press, p.179-192.
  • *Li, F., Griffiths, C.M.,  Dyt, C.P., Weill, P., Feng, M., Salles, T. and Jenkins, C. 2009. Multigrain seabed sediment transport modelling for the south-west Australian Shelf. Marine and Freshwater Research, 60(7), 774–785.
  • Goff, J.A., Jenkins, C.J. and Williams, S.J. 2008. Seabed mapping and characterization of sediment variability using the usSEABED data base. Continental Shelf Research, 28(4-5), 614-633.
  • Jenkins, C. and Wever, T. 2007. Naval Mine Impact Burial Prediction using Seafloor Database, Experiment, and GIS Technologies. Marine Geores. & Geotech., 25(3), 199-208. [DOI: 10.1080/10641190701688734]
  • Williams, S.J., Bliss, J.D., Arsenault, M.A., Jenkins, C.J. and Goff, J.A. 2007. Geologic Characterization of Offshore of Shelf Areas Using usSEABED for GIS Mapping, Modeling Processes and Assessing Marine Sand and Gravel Resources, p.2473-2486. In: Kraus, N.C. & Rosati, J.D. [Eds], Coastal Sediments '07: Proceedings of the Sixth International Symposium on Coastal Engineering and Science of Coastal Sediment Processes, May 13–17, 2007, New Orleans, Louisiana [doi: 10.1061/40926(239)194].
  • Goff, J.A., Jenkins, C.J. & Calder, B. 2006. Maximum likelihood resampling of noisy, spatially correlated data. Geochemistry, Geophysics, Geosystems, 7(8), Q08003,[doi:10.1029/2006GC001297, ISSN: 1525-2027].
  • Wever, T.F. & Jenkins, C.J. 2006. Mine Burial Prediction Based On Doctrines Applied To Sediment Data Bases. Underw. Defence Technol. Europe 2006, Sess. 10C.1.
  • Jenkins, C., Flocks, J. & Kulp, K. 2006. Integration of the Stratigraphic Aspects of very large Seafloor Databases using Information Processing. In: Rothwell, G. (Ed.), New Techniques in Sediment Core Analysis, Geological Society Special Publns 276, 200pp. [ISBN 978-1-86239-210-6]
  • Li, F., Dyt, C., Griffiths, C.M., Jenkins, C., Rutherford, M., and Chittleborough, J. 2005. Seabed Sediment Transport and Offshore Pipeline Risks in the Australian Southeast. APPEA Journal 45, 523-534. 
  • Kulp, M., Penland,S., Williams,S.J., Jenkins, C., Flocks, J., and Kindinger. J., 2005. Geologic Framework, Evolution and Sediment Resources for Restoration of the Louisiana Coastal Zone. Journal of Coastal Research, Special Issue, 44, p. 56-71.
  • Porter-Smith, R., Harris, P.T., Anderson, O., Coleman, R., Greenslade, D. and Jenkins, C.J., 2004. Classification of the Australian continental shelf based on predicted sediment threshold exceedance from tidal currents and swell waves. Marine Geology 211, 1-20.
  • Williams, S.J., Jenkins, C., Currence, J., Penland, S., S., Reid, J., Flocks, J., Kindinger, J.L., Poppe, L.J., Kulp, M., Manheim, F.T., Hampton, M., Polloni, C.F., and Rowland, J., 2003. New digital geologic maps of U.S. continental margins; insights to seafloor sedimentary character, aggregate resources and processes. In: Coastal Sediments '03 Conference Proceedings, Fifth International Symposium on Coastal Engineering and Science of Coastal Sediment Processes, Crossing Disciplinary Boundaries, Clearwater Beach, Fl., 18-23 May 2003, 12 p.
  • Jenkins, C.J. 2002. Automated digital mapping of sediment colour descriptions. Geo-Marine Letters, 22(4), 181-7.
  • Goff, J. A., L, A. Mayer, P. Traykovski, I. Buynevich, R. Wilkens, R. Raymond, G. Glang, R. L. Evans, H. Olson, and C. Jenkins, 2004. Detailed investigation of sorted bedforms, or 'rippled scour depressions', within the Martha's Vineyard Coastal Observatory, Massachusetts, Continental Shelf Research, 209, 147-172. 
  • Kritski, A. & Jenkins, C. 2000. Low Frequency Bottom Reflectivity from Reflection (Seismic Data). In: Acoustics 2000. Australian Acoustical Society Conference, Joondalup, Australia,  15-17 November2000, p. 1-6.
  • Jenkins, C.J. & Keene, J.B. 1992. Submarine slope failures on the south-east Australian continental slope: a thinly sedimented margin. Deep-Sea Research, 29, 121-136. 
  • Jenkins, C.J. 1992. Abyssal sediment drifts, erosion and history of bottom water flow in the Tasman Sea southwest of New Zealand. Australian Journal of Earth Sciences, 39, 195-210.
  • Jenkins, C.J., Hunt, B. & Lawrence, M. 1991. GLORIA  Super-Sidescan Imagery of the Continental Slope East of Sydney-Batemans Bay. Special Publication  No. 27, 291-298. Hydrographic Society, Monaco.
  • Mulhearn, P. & Jenkins, C. 1990. Bottom-water Circulation In A Perched Sub-basin. Deep Sea Research Part A. Oceanographic Research Papers 37(5), 747-754.
  • Malikides, M., Harris, P.T., Jenkins, C.J. & Keene, J.B. 1988. Carbonate sandwaves in Bass Strait. Australian Journal of Earth Sciences, 35, 303-311.
  • Barron, J., Larsen, B. & shipboard party (incl. Jenkins, C.J.), 1988. Middle Cenozoic initiation of ice sheet development in Prydz Bay, East Antartica. Nature, 333, 303-4.
Published Articles
  • Jenkins, C.J. 1997. Building Offshore Soils Databases. Sea Technology, 38(12), pp. 25-28. 
  • Jenkins, C.J. 2003. Data Management of MARGINS Geologic Data,with Emphasis on Efficiency,Quality Control and Data Integration. MARGINS Newsletter, 10, 8-10.
  • Williams, S.J., Jenkins, C., Currence, J., and Reid, J., 2003, New digital geologic maps of U.S. Continental Margins; insights to seafloor sedimentary character, aggregate resources and processes, U.S. Geological Survey Information Sheet, May 2003.
Published Abstracts
  • Reid, J.A., Jenkins, C.J., Field, M.E., Gardner, J.V., Zimmermann, M., Box, Carolynn E., and Kneeshaw, T.A., 2001, usSEABED: Database efforts in marine surficial sediments of the US EEZ, EOS Transactions, American Geophysical Union, 2001 Fall Meeting, p. F593.
  • Kilbourne, K.H., Field, M.E., Gardner, J.V. and Jenkins, C.J. 1999. Evaluating Benthic Fish Habitats on the Continental Shelf  and Slope of the Southern California Bight:  Design and Use of a Benthic Character Database. EOS Transactions, American Geophysical Union, 2000 Ocean Sciences Meeting, 80(49) supplement.
  • Kilbourne, K.H., Field, M.E., Gardner, J.V., Zimmermann, M. and Jenkins, C.J. 1999. Bottom Character on the Pacific Shelf and Slope of the US and Southern Canada:  a Foundation for Evaluating Benthic Fish Habitats. EOS Transactions, American Geophysical Union, 1999 Fall Meeting, 80(46) supplement.
  • Reid, J. A., Jenkins, C., Field, M. E., Gardner, J. V. and Box, C. E. 2001. USSEABED: defining the surficial geology of the continental shelf through data integration and fuzzy set theory. Geological Society of America Annual Meeting, Boston, MA. Abstracts with Programs 33:A106.
  • Jenkins, C.J. 2003. The Patchiness of Benthic Substrates, Measured Using the usSEABED Data Structure. GeoHab 2003, Hobart 30-31 April 2003.
  • Goff, J.A., Mayer, L.A., Schwab, B., Traykovski,P., Wilkins, R., Jenkins, C., Kraft, B., Evans, R. & Buynevich, I., 2002. Site Survey of the Martha's Vineyard Coastal Observatory: Backscatter, Grain Size and Temporal Evolution of Rippled Scour Depressions, EOS Trans. AGU, 83 (47), Fall Meet. Suppl., Abstract OS61A-0181.
  • Kraft, B.J., Mayer, L.A., Simpkin, P., Goff, J.A., Schwab, B. & Jenkins, C. 2002. In Situ Measurement of Sediment Properties and Relationship to Backscatter: An Example From the ONR Mine Burial Program, Martha's Vineyard Coastal Observatory, EOS Trans. AGU, 83 (47), Fall Meet. Suppl., Abstract OS61A-0182.
  • Porter-Smith, R., Harris, P.T., Heap, A., Anderson, O., Coleman, R., Greenslade, D. & Jenkins, C.J. 2003. Classification of the Tasmanian continental shelf using multivariate analysis of wave and tide dynamics and physical sediment parameters. In: Proceedings of GEOHAB 2003: Geological Mapping of Habitats for Marine Resources and Management, Hobart, Apr 30–May 2 2003. 
  • Jenkins, C., Morin, P., Williams, S.J, Penland, S., Sharman, G., Flocks, J., Kindinger, J. 2004. Experiments with Visualization Technology Applied to Global Seabed Database. AGU Fall Meeting 2004, Abstract SF13A-0706.
  • Goff, J. and Jenkins, C. 2005. Maximum likelihood resampling of noisy, spatially correlated data. Eos Trans. AGU, 86(52), Fall Meet. Suppl., Abstract OS32C-04. [San Francisco, CA Wed 6 Dec. 2005]
  • Jenkins, C.J. 1999. A GIS of the Great Barrier Reef benthic physical habitats. Nth Qld. Sedim., 1st Ann. Meet., June 1999. (James Cook Univ. Publ.)
  • Jenkins, C.J. 2003. New Computing Methods for Generating National Coverages of Seabed Core and Sample data. In: Rothwell, G. (Ed.), New ways of looking at sediment cores and core data.  An international conference at Southampton Oceanography Centre 4-5th September 2003.  Challenger Division for Seafloor Processes, Southampton Oceanography Centre, Southampton, UK.
  • Kilbourne, K.H., Field, M.E., Gardner, J.V. and Jenkins, C.J. 1999. Benthic Habitat Mapping and Data Management: A Versatile Approach. Third Biennial USGS Geographic Information Science Workshop. Denver, CO.
  • Reid, J.A., Jenkins, C.J., Field, M.E., Gardner, J.V., and Box, C.E., 2001, usSEABED: Defining the surficial geology of the continental shelf through data integration and fuzzy set theory. Geological Society of America Annual Meeting
  • Reid, J. A., Jenkins, C.J., Field, M.E., Zimmermann, M., Gardner, J.V., Box, C.E., and Kneeshaw, T.A., 2002, Towards an integrated prediction of seabed character: usSEABED. USGS Coastal and Marine Geology Program Five-year Planning Meeting, Palo Alto, CA
  • Reid, J. A., Jenkins, C.J., M.E. Field, M. Zimmermann, James V. Gardner, Carolynn E. Box, and Tara A. Kneeshaw, 2001. usSEABED: Mining seabed data for more than textural information. USGS Gulf of Mexico Integrated Database Workshop, St. Petersburg, FLA
  • Williams,  S. J., Hampton, M.,  Jenkins, C., Currence, J., Poppe, L., Penland, S., Reid, J., Flocks, J., Kindinger, J., Kulp, M., Manheim, F., Polloni, C., Rowland, J. 2002. New  Digital  Geological  Maps  of  U.S.  Continental  Margins: Insights to Seafloor  Sedimentary  Character  and Processes, Tools for Assessing Marine Aggregate Resources. Coastal Sediments-03 Conference, 2002, 1p.
  • Zimmermann, M., Kilbourne, K.H., Reid, J.A., Field, M.E., Gardner, J.V., Jenkins, C., Currie, R.G., and Bornhold, B. B. D., 2002, Use of surficial sediment information and species assemblage analysis for improving trawl survey stratification and abundance estimation. 2002 Western Groundfish Conference, Ocean Shores, WA
  • Jenkins, C.J., Reid, J.A., and Field, M.E., 2001. Digital Maps of the Seabed Color Rendered in True Color. Geol. Soc. Am. (Abstr), Fall 2001.
  • Williams, S.J., Jenkins, C., Reid, J., Penland, S., and others 2004. Regional-scale sediment maps of U.S. Continental Margins: insights to sedimentary character and processes, aggregate resources. Geological Society of America, Northeastern and Southeastern Sections Joint Meeting, Tysons Corner, Va., 25-27 March 2004.
Data Deliveries and Interactive mappings
  • Reid, J.A., Reid, J.M., Jenkins, C.J., Zimmermann, Mark, Williams, S.J., and Field, M.E., 2006, usSEABED: Pacific coast (California, Oregon,
    Washington) offshore surficial-sediment data release: U.S. Geological Survey Data Series 182 [available on the World Wide Web at URL
    http://pubs.usgs.gov/ds/2006/182/ ].
  • Buczkowski, B.J., Reid, J.A., Jenkins, C.J., Reid, J.M., Williams, S.J., and Flocks, J.G., 2006, usSEABED: Gulf of Mexico and Carribbean (Puerto Rico and U.S. Virgin Islands) Offshore Surficial Sediment Data Release: U.S. Geological Survey Data Series 146, Version 1.0, CD-ROM. ONLINE. ["http://pubs.usgs.gov/ds/2006/146/"]
  • Williams, S.J., Arsenault, M.A., Poppe, L.J., Reid, J.A., Reid, J.M. and Jenkins, C.J., 2006, Surficial sediment character of the New York-New Jersey offshore Continental Shelf region: a GIS Compilation. [Online: http://pubs.usgs.gov/ofr/2006/1046.]
  • Reid, J.M., Reid, J.A., Jenkins, C.J., Hastings, M.E., Williams, S.J., and Poppe, L.J, 2005, usSEABED: Atlantic coast offshore surficial sediment data release: U.S. Geological Survey Data Series 118, version 1.0. Online at http://pubs.usgs.gov/ds/2005/118/ [Also as CD-ROM.]
  • Jenkins, C.J., Kettner, A.J., Moore, C., Sharman, G. 2003. goSEABED World Seabed Data Browser. Univ. Colorado, Inst. Arctic and Alpine Res., Boulder, CO, USA. ["http://instaar.colorado.edu/~jenkinsc/dbseabed/goseabed/interactive/", 6 June 2003].  (Server URL)
  • Jenkins, C.J. & Kettner, A.J. 2002. Northern Gulf of Mexico iSEABED. [“http://instaar.colorado.edu/~jenkinsc/dbseabed/usseabed/interactive/”; 7 Jan 2003 download]  (Server URL)
  • Reid, J.A. and others 2002. usSEABED - West Coast Seabed Samples. [“http://kai.er.usgs.gov/regional/contusa/westcoast/”, 23 Sep 2002 download] (Server URL)
  • Reid, J.A. and others, 2002. usSEABED - East Coast Seabed Samples. ["http://kai.er.usgs.gov/regional/contusa/eastcoast/", 23 Sep 2002 download] (Server URL)
  • Reid, J.A. and others, 2002. usSEABED - Gulf of Mexico Seabed Samples. ["http://kai.er.usgs.gov/regional/contusa/gomex/", 23 Sep 2002 download] (Server URL)
Reports
  • Jenkins, C.J. 2004. Report for the US Geological Survey & University of Colorado collaboration in usSEABED – dbSEABED: 2003-4. ["http://instaar.colorado.edu/~jenkinsc/dbseabed/usseabed/CU_USGS2003-4_Report.pdf"] 
  • Jenkins, C.J. 2002. Improved Data Input Systems for Mine Burial Prediction (Final NICOP Report) ["http://www.onrifo.navy.mil/reports/nicop/2002/02CJenkinscNICOPfinal02.doc"] 
  • Jenkins, C.J., Short, A.D., Field, M.E. 2002. Improved Information Systems for Mine Burial Prediction: FY2002 Report. ["http://www.onr.navy.mil/sci_tech/ocean/reports/docs/mg/02/mgjenkin.pdf"] 
  • Jenkins, C.J., Short, A.D., Field, M.E. 2001. Progress Report to ONR: Improved Information Systems for Mine Burial Prediction. ["http://www.onr.navy.mil/sci_tech/ocean/reports/docs/mg/01/mgjenkin.pdf"]
  • Kritski, A. & Jenkins, C.J. 1999. Extraction of acoustical properties of sediments from reflection seismic data: 2. Data reading & display. Sydney
    University Ocean Sciences Institute Report, 86, 1-16.
  • *Jenkins, C.J. 1997. Construction of Marine Substrate Maps for Habitat Protection, Victoria, Australia. Syd. Univ. Ocean Sci. Inst. Rep., 81, May 1997
  • Heggie, D., Bickford, G., Bishop, J., Hansen, J., Fagan, P., Tate, P., Birch, G., Keene, J., Ferland, M., Jenkins, C. & Roy, P. 1992. Offshore Sydney Basin and NSW Continental Margin Geochemistry and Sedimentology: Natural Processes, Anthropogenic Contributions and Nonrenewable Resources; Project 121.37. BMR Record 1992/35, 47p.
  • Jenkins, C. J. 1991. Seafloor acoustic properties for propagation loss calculations, north Australia. University of Sydney, Ocean Sciences Institute Report, 50, ##p.
  • Jenkins, C. J. 1991. Parameters for geoacoustic models : Tasman Sea and south-west Pacific Seamap routes. University of Sydney, Ocean Sciences Institute Report, 46, ##p.
  • Jenkins, C. J. 1991. A review of seafloor acoustic properties for the Tasman Sea and south-west Pacific Ocean. University of Sydney, Ocean Sciences Institute Report, 45, ##p.
  • Jenkins, C. J. 1991. Geological and geophysical studies in support of acoustic experiments in the northeastern Indian Ocean. University of Sydney, Ocean Sciences Institute Report, 42, 299p.
  • Jenkins, C.J. & Lawrence, M.W., 1990. Report on the RAN Marconi GLORIA survey of the EAXA: continental margin of southeastern Australia: University of Sydney, Ocean Sciences Institute Technical Report 22, 1-17.
  • Jenkins, C.J., Pritchard, T.R. & Hannigan, M.L., 1990: Acoustic Ocean -bottom Roughness: Report on data processing for Australian areas. Univ.Syd., Ocean Sci. Inst. Tech. Rep. 21, 1-20.
  • Jenkins, C.J. & Pritchard, T.R., 1989: Geological and Geophysical Studies in Support of Acoustic Bottom-interaction experiments: HMAS 'Cook' Cruise MSD 15/89 Tasman, Coral and Solomon Seas. Univ. Syd., Ocean Sci. Inst. Rep. 35, 1-176.
  • Baker, E.K., Harris, P.T., Hubble, T.C.Y., Jenkins, C.J., Keene, J.B., Manning, P.B., Packham, G.H., Pritchard, T.R., Schneider, P.M. and Tate, P.M., 1988. Geophysical and geological results of the HMAS Cook SEAMAP cruise 1-86: North Tasman Sea and Polynesia. Univ. Syd., Ocean Sci. Inst. Rep. 30, 1-113.
  • Jenkins,  C.J. 1988. Preliminary Design for a Stand-alone Oceanographic Turbidity Meter. Ocean Sciences Inst.  Tech. Rep., Univ. Sydney, 13, 68p.
  • Harris, P.T., Jenkins, C.J., Packham, G.H., Baker, E.K., Pritchard, T.R ., Schneider, P.M. & Manning, P.B., 1987. Geophysical and Geological Results of the HMAS 'Cook' Seamap Cruise 12-87: Tasman Sea and Polynesia . Univ. Syd., Ocean Sci. Inst. Rep. 26, 1-30.
  • Jenkins,  C.J. 1986. Geophysical survey crossings of "SEAMAP" tracks in the Tasman Sea : Bureau of Mineral Resources data. Ocean Sciences Inst.  Rep., Univ. Sydney, 19, 72p.
  • Jenkins, C.J., Coleman, R., Keene, J.B., Pritchard, T.R ., Manning, P.B. and Schneider, P.M., 1986. Geophysical/Geological Results of the 'Cook' Seamap 6-85: South Tasman Sea and Southwest Pacific Ocean. Univ.Syd., Ocean Sci. Inst. Rep. 20, 1-66.
  • Jenkins,  C.J. 1985. Seafloor photography in the Tasman sea : results of the 1985 Sydney University / H.M.A.S. "Cook" program. Ocean Sciences Inst.  Rep., Univ. Sydney, 18, 47p.
  • Jenkins,  C.J. 1985. Miocene to recent sediments, mesoscopic tectonic structures and bathymetric results from the north Tonga Arc and Lau Basin. Ocean Sciences Inst.  Rep., Univ. Sydney, 12, 39p.
  • Jenkins,  C.J. 1985. Late Cenozoic erosion and re-deposition west of the northern Macquarie Ridge : a seismic stratigraphic study of abyssal bottom-current patterns. Ocean Sciences Inst.  Rep., Univ. Sydney, 14, 34p.
  • Jenkins,  C.J. 1984. Erosion and Deposition at Abyssal Depths in the Tasman Sea: A Seismic Stratigraphic Study of the Bottom-current Patterns. Ocean Sciences Inst.  Rep., Univ. Sydney, 4, 47p.
  • Hubble, T.C.T.  &  Jenkins,  C.J. 1984. Sediment cores from the N.S.W. continental slope of Port Stephens, Port Macquarie and Coffs Harbour (31⁰-33⁰S). Ocean Sciences Inst.  Rep., Univ. Sydney, 6, 44p.
  • Hubble, T.C.T.  &  Jenkins,  C.J. 1984. Sediment samples and cores from the southern New South Wales upper continental slope 36⁰00'S to 37⁰15'S (H.M.A.S. Kimbla, November 1982). Ocean Sciences Inst.  Rep., Univ. Sydney, 8, 37p.
  • Jenkins,  C.J. 1984. A geoacoustic model of the continental slope of northern N.S.W. at 31⁰S latitude, and of Derwent-Hunter Seamount, 31⁰S, 156⁰E. Ocean Sciences Inst.  Rep., Univ. Sydney, 5, 40p.
  • Beavis, A.R. & Jenkins,  C.J. 1984. Bottom photography in the Tasman Sea : Cook 1/84-SEAMAP cruise. Ocean Sciences Inst.  Tech. Rep., Univ. Sydney, 3, 13p.
Posters Presented
  • Williams, S. J., Jenkins, C., Reid, J.M., Poppe, L. J., and Reid, J., 2003.  Insights to seafloor sedimentary character, processes and aggregate resources of U.S. continental margins. Minerals Management Service Offshore Sand Workshop, 23 October 2003, Delaware Geological Geological Survey, Newark, DL.
  • Wiberg, P.L. and Jenkins, C.J. 2003. Spatial abundance of permeable sediment on the eastern US continental shelf. Gordon Research Conference on Permeable Sediments, June 15 - 20, 2003, Bates College, Lewiston, Maine 
  • Ito, E., Morin, P., Rao, A., Chen, J., Leigh, J., Johnson, A., Kamp, B., Jenkins, C., Higgens, S. 2006. CoreWall, An Integrated Environment for Interpretation of Geoscientific Data from Sediment, Ice and Crystalline Cores. European Geophysical Union, April 2006.
  • Jenkins, C.J., Ryan, W.B. & Haxby, W. 2005. Management of Linguistic Data. 21 Nov 2005 IODP Meeting, TAMU, College Station TX.
Electronic Documents
  • Rubec, P.J., J. Lewis, D. Reed, C.F. Ashbaugh, C. Lashley, S. Versaggi, R.H. Weisberg, L. Zheng, R. He, and C. Jenkins.   2005a.  Refinement of An Electronic Logbook To Support Fishing Operations By Predicting Abundance In Relation To Environmental Conditions Off The West Coast Of Florida. Report by Florida Fish & Wildlife Conservation Commission, Fish & Wildlife Research Institute to the Gulf and South Atlantic Fisheries Foundation Inc., Tampa, Florida, 73 pp. + 2 CD-ROMs.
  • Williams, S.J., Arsenault, M.A., Bliss, J.D., Buczkowski, B.J., Jenkins, C.J., Poppe, L.J., Reid, J.A., 2006. Marine Aggregate Resources and Processes (MARP): National Assessment of Offshore Sand Resources. ["http://woodshole.er.usgs.gov/project-pages/aggregates/index.htm"]

Palaeozoic studies
  • Jenkins, C.J., 1987. The Ordovician graptoloid Didymograptus murchisoni in South Wales and its use in three-dimensional absolute strain analysis. Transactions of the Royal Society of Edinburgh: Earth Sciences, 78, 105-114.
  • Jenkins, C.J. (compiler), 1986. The Silurian of mainland Australia: a field guide. IUGS Silurian Subcommission, University of Sydney, Sydney, 82 pp.
  • Ross, R.J., Naeser, C.W., Izett, G.A., Obradovich, J.D., Bassett, M.G., Hughes, C.P., Cocks, L.R.M., Dean, W.T., Ingham, J.K., Jenkins, C.J., Rickards, R.B., Sheldon, P.R., Toghill, P., Whittington, H.B. and Zalasiewicz, J. 1982. Fission-track dating of British Ordovician and Silurian stratotypes. Geological Magazine, 119, 135-153.
  • Jenkins, C. J. 1982. Late Pridolian graptolites from the Elmside Formation near Yass, New South Wales. Proceedings of the Linnean Society of NSW, 106: 167-172.
  • Jenkins, C. J. 1982. Darriwilian (Middle Ordovician) graptolites from the Monaro Trough sequence east of Braidwood, New South Wales. Proceedings of the Linnean Society of NSW, 106: 173-179.
  • Jenkins, C. 1982. Isograptus gibberulus (Nicholson) and the isograptids of the Arenig Series (Ordovician) of England and Wales. Proceedings of the Yorkshire Geological Society, 44, 219–248.
  • Hughes, C.P., Jenkins, C.J., Rickards, R.B., 1982. Abereiddi Bay and the adjacent coast. In: Geological excursions in Dyfed, South-West Wales, p. 51-63. National Museum of Wales, Cardiff. 
  • Jenkins, C. 1980. Maeandrograptus schmalenseei and its bearing on the origin of the diplograptids. Lethaia, 13, 289–302.
  • Jenkins, C.J., 1979. Stratigraphy and graptolite biostratigraphy of the Llanvirn series’ type area, St. David’s, Dyfed, Wales. Ph.D. dissertation, University of Cambridge. Department of Geology.
  • Jenkins, C.J., 1978. Llandovery and Wenlock stratigraphy of the Panuara area, central New South Wales. Proceedings of the Linnean Society of New South Wales 102: 109–130.
  • Crowther, P.R. and Jenkins, C.J., 1976. Retiolitids from the Llanvirn and Darriwillian. Geological Magazine, 113, 3, 277-286.
  • Jenkins, C.J., 1973. Silurian biostratigraphy of the Four Mile Creek and “Angullong” area, central western N.S.W. Unpublished BSc (Hons) thesis, University of Sydney, 139 pp.

Research Grants
(Selected, in addition to contracts)

United States

  • Jenkins et al. 2014. Porting Practical Natural Language Processing (NLP) and Machine Learning (ML) Semantics from Biomedicine to the Earth, Ice and Life Sciences. NSF C1F21 DIBBS
  • Lehnert & others, 2013. C4P: Collaboration and Cyberinfrastructure for Paleogeosciences. NSF EarthCube RCN 
  • Livny & others 2012. Bringing Together Computational and Linguistic Methods to Extract 'Dark' Geosciences Data for the EarthCube Framework. NSF EAGER Collaborative Research.
  • Jenkins 2011. Population Ecology Models for Carbonate Sediments. NSF Collaborative Research
  • Jenkins 2010. Seamless Marine-wetlands-coastal Soils Database to Support Urgent Decision-making Against the Deepwater Horizon Coastal Oiling. NSF RAPID.
  • Ito & others 2006. CoreWall--Integrated Environment for Interpretation of Geoscientific Data from Sediment and Crystalline Cores. NSF Collaborative Research.
Germany
  • Jenkins 2013. Impact of Biological Activity at the Seafloor on its Hydrodynamic and Underwater Sound Properties (bioSEABED). FWG.


Talks, Lectures, Webinars
(Partial list)
  • Population Ecology Modeling of Marine Shallow-Water Carbonates. Monday 15 Sep 2014, INSTAAR Monday Seminar, Boulder CO, USA.
  • Geologic Time and Paleocoordinate methods in the Global Seafloor Geology Database (dbSEABED). 10 Sep 2014, Advances And Emergent Needs in Paleogeoscience Cyberinfrastructure, (C4P) NSF RCN Webinars. [URL: "https://www.youtube.com/watch?v=sYoD2637cgg"]
  • About the Upcoming Workshop 'Computing with Geologic Time'. 26 Aug 2014, Advances And Emergent Needs in Paleogeoscience Cyberinfrastructure, (C4P) NSF RCN Webinars. [URL: "http://youtu.be/mkToSkk-skE"]
  • Computational Issues with Geologic Time (Colloquium).    Sunday, June 29, 2014 - 15:53,    Meeting Session, Copper Mountain, CO, USA 
  • Global data on Seafloor Materials and Features Assists Modeling of Earth-Surface Dynamics. 4 June 2013, Dalhousie Univ, Halifax, CA.
  • Wordy Data. ESIP Innovators Among Us - Lightning Talks. Monday, December 3, 2012 - 10:09, Meeting Session, Madison, MN, USA. [URL: "http://commons.esipfed.org/printpdf/572"]
  • Google & Wordnet methods applied to sediment/rock/soil vocabularies. Monday 20 Feb 2012, INSTAAR Monday Seminar, Boulder CO, USA. (Handbill)
  • Seafloor Sediments: Unlocking the Information from the Word-based Data-sets. July 2009, LDEO, Columbia Univ, NY, USA.


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Date: 16 Sep 2014
Copyright: INSTAAR, UnivColorado